Publications

Preprints

Published

S Chamberland, Y Timofeeva, A Evstratova, C Norman, K Volynski, K Toth, Slow-decaying presynaptic calcium dynamics gate long-lasting asynchronous release at the hippocampal mossy fiber to CA3 pyramidal cell synapse, Synapse, e22178, 2020.

O Tyurikova, K Zheng, E Nicholson, Y Timofeeva, A Semyanov, K Volynski, DA Rusakov, Fluorescence lifetime imaging reveals regulation of presynaptic Ca2+ by glutamate uptake and mGluRs, but not somatic voltage in cortical neurons, Journal of Neurochemistry, 2020.

E Tagliatti, O D Bello, PRF Mendonca, D Kotzadimitriou, E Nicholson, J Coleman, Y Timofeeva, J E Rothman, S S Krishnakumar, K Volynski, Synaptotagmin 1 oligomers clamp and regulate different modes of neurotransmitter release, PNAS, 117 (7), 2020.

R Gowers, Y Timofeeva, MJE Richardson, Low-rate firing limit for neurons with axon, soma and dendrites driven by spatially distributed stochastic synapses PLOS Computational Biology, 16(4), 2020.

Lu Yihe, Y Timofeeva, Exact solutions to cable equations in branching neurons with tapering dendrites Journal of Mathematical Neuroscience, 10(1), 2020.

S Chamberland, Y Timofeeva, A Evstratova, K Volynski, K Toth, Action potential counting at giant mossy fiber terminals gates information transfer in the hippocampus, PNAS, 115 (28), 2018.

Lu Yihe, Y Timofeeva, Response functions for electrically coupled neuronal network: a method of local point matching and its applications, Biological Cybernetics, 110: 117-133, 2016.

Y Timofeeva, K Volynski, Calmodulin as a major calcium buffer shaping vesicular release and short-term synaptic plasticity: facilitation through buffer dislocation, Frontiers in Cellular Neuroscience 9:239, 2015.

Y S Ermolyuk, F G Alder, R Surges, I Y Pavlov, Y Timofeeva, D M Kullmann, K E Volynski, Differential triggering of spontaneous glutamate release by P/Q-, N- and R-type Ca2+ channels, Nature Neuroscience, 16, 1754-1763, 2013.

Y Timofeeva, S Coombes Network response of gap junction coupled dendrites, in "Dendritic Computations through Morphology and Connectivity", Springer, 2013.

Y Timofeeva Complexity and Chaos in Dynamical Systems, in "Masters of Complexity Science", the London Mathematical Society Lecture Note Series, 2013.

Y Timofeeva, S Coombes, D Michieletto, Gap junctions, dendrites and resonances: a recipe for tuning network dynamics, Journal of Mathematical Neuroscience, Vol 3:15, 2013.

S Coombes and Y Timofeeva, Editorial for Special Issue on Neurodynamics, Journal of Mathematical Neuroscience, Vol 3:10, 2013.

Q Caudron, S R Donnelly, S P C Brand, Y Timofeeva, Computational convergence of the path integral for real dendritic morphologies, Journal of Mathematical Neuroscience, Vol 2:11, 2012.

C Iglesias, C Meunier, M Manuel, Y Timofeeva, N Delestree and D Zytnicki, Mixed mode oscillations in mouse spinal motoneurons arise from a low excitability state, Journal of Neuroscience, Vol 31 (15), 5829-5840, 2011.

J Harris and Y Timofeeva, Intercellular calcium waves in the fire-diffuse-fire framework: Green's function for gap-junctional coupling, Physical Review E, Vol 82 (5), 051910, 2010.

S Coombes and Y Timofeeva, Mathematical neuroscience special issue: Editorial, Physica D: Nonlinear Phenomena, Vol 239, Issue 9, 475-476, 2010.

Y Timofeeva, Travelling waves in a model of quasi-active dendrites with active spines, Physica D: Nonlinear Phenomena, Vol 239, Issue 9, 494-503, 2010.

Y Timofeeva, S J Cox, S Coombes and K Josic, Democratization in a passive dendritic tree: an analytical investigation, Journal of Computational Neuroscience, Vol 25, 228-244, 2008.

S Coombes, Y Timofeeva, C-M Svensson, G J Lord, K Josic, S J Cox and C M Colbert, Branching dendrites with resonant membrane: A "sum-over-trips" approach, Biological Cybernetics, Vol 97, 137-149, 2007

Y Timofeeva, G J Lord and S Coombes, Spatio-temporal filtering properties of a dendritic cable with active spines, Journal of Computational Neuroscience, Vol 21, 293-306, 2006.

Y Timofeeva, G J Lord and S Coombes, Dendritic cable with active spines: a modeling study in the spike-diffuse-spike framework, Neurocomputing, Vol 69, Issues 10-12, 1058-1061, 2005.

Y Timofeeva and S Coombes, Directed percolation in a two dimensional stochastic fire-diffuse-fire model, Physical Review E, Vol 70, 062901-3, 2004.

S Coombes, R Hinch and Y Timofeeva, Receptors, sparks and waves in a fire-diffuse-fire framework for calcium release, Progress in Biophysics and Molecular Biology, Vol 85, 197-216, 2004.

Y Timofeeva and S Coombes, Wave bifurcation and propagation failure in a model of calcium release, Journal of Mathematical Biology, Vol 47, 249-269, 2003.

S Coombes and Y Timofeeva, Sparks and waves in a stochastic fire-diffuse-fire model of calcium release, Physical Review E, Vol 68, 021915, 2003.

Y Timofeeva and S Coombes, A stochastic fire-diffuse-fire model of calcium release, FORMA, Vol 18, 53-58, 2003.

Y Timofeeva 2003 PhD thesis "Oscillations and Waves in Single and Multi-cellular Systems with Free Calcium" (Abstract), ( Full text PDF - 11.2MB).